vcfppR - Rapid Manipulation of the Variant Call Format (VCF)
The 'vcfpp.h' (<https://github.com/Zilong-Li/vcfpp>) provides an easy-to-use 'C++' 'API' of 'htslib', offering full functionality for manipulating Variant Call Format (VCF) files. The 'vcfppR' package serves as the R bindings of the 'vcfpp.h' library, enabling rapid processing of both compressed and uncompressed VCF files. Explore a range of powerful features for efficient VCF data manipulation.
Last updated 1 days ago
bioinformaticsfastrhtslibpopulation-geneticspopulation-genomicsvcfvcf-datavisulizationlibdeflatezlibbzip2xz-utilscurlcpp
6.70 score 13 stars 16 scripts 338 downloadspcaone - Fast and Accurate Randomized Singular Value Decomposition Algorithms with 'PCAone'
Fast and Accurate Randomized Singular Value Decomposition (RSVD) methods proposed in the 'PCAone' paper by Li (2023) <https://genome.cshlp.org/content/33/9/1599>.
Last updated 7 hours ago
matrix-factorizationpcarcppeigenrsvdsvdopenblascpp
4.00 score 4 stars 6 scripts 190 downloads