Package: pcaone 1.5.0
pcaone: Fast and Accurate Randomized Singular Value Decomposition Algorithms with 'PCAone'
Fast and Accurate Randomized Singular Value Decomposition (RSVD) methods proposed in the 'PCAone' paper by Li (2023) <https://genome.cshlp.org/content/33/9/1599>.
Authors:
pcaone_1.5.0.tar.gz
pcaone_1.5.0.zip(r-4.7)pcaone_1.5.0.zip(r-4.6)pcaone_1.5.0.zip(r-4.5)
pcaone_1.5.0.tgz(r-4.6-x86_64)pcaone_1.5.0.tgz(r-4.6-arm64)pcaone_1.5.0.tgz(r-4.5-x86_64)pcaone_1.5.0.tgz(r-4.5-arm64)
pcaone_1.5.0.tar.gz(r-4.7-arm64)pcaone_1.5.0.tar.gz(r-4.7-x86_64)pcaone_1.5.0.tar.gz(r-4.6-arm64)pcaone_1.5.0.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
card.svg |card.png
pcaone/json (API)
NEWS
| # Install 'pcaone' in R: |
| install.packages('pcaone', repos = c('https://zilong-li.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/zilong-li/pcaoner/issues
matrix-factorizationpcarcppeigenrsvdsvdopenblascpp
Last updated from:e6df624834. Checks:12 OK, 1 FAIL. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 225 | ||
| linux-devel-x86_64 | OK | 184 | ||
| source / vignettes | OK | 174 | ||
| linux-release-arm64 | OK | 217 | ||
| linux-release-x86_64 | OK | 173 | ||
| macos-release-arm64 | OK | 143 | ||
| macos-release-x86_64 | OK | 331 | ||
| macos-oldrel-arm64 | OK | 164 | ||
| macos-oldrel-x86_64 | OK | 662 | ||
| windows-devel | OK | 223 | ||
| windows-release | OK | 213 | ||
| windows-oldrel | OK | 245 | ||
| wasm-release | FAIL | 118 |
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Dynamic shifted Randomized SVD | dashSVD |
| Randomized Singular Value Decomposition Algorithm with Window-based Power Iterations from PCAone (Li et al 2022). | pcaone pcaone.dgCMatrix pcaone.dgRMatrix pcaone.matrix |
| Population genetic data | popgen |
| Window-based Randomized SVD | winSVD |
